> PLPR0190 ..AC:AB024054 ..OS:Oryza sativa ..GENE:OsENOD40 ..PROD:OsENOD40 ..[ -200: +51] ..CDS:+92 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.29 G - 0.22 T - 0.29 C - 0.19
1 gggtttgtaa gtggaatgag aatttctcta gagaaggaat atagttagaa
51 ttgacatgat gagggaagaa caacctcagt gtgaagtcca gcaaatgagc
101 acttggcaca gtttttactt tcATTGTcct ttctccacta agcatgctgc
151 gctgtccaat ttaaaatgct accatgcaga ttctgggttc tttgcaattg
201 ATTTCTCTGG AGAAGTACCT GCAGACATCA GCAACCTCGT CAAGGTATAA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00115 Mean Expected Number 0.005 -strand +8 : -3 AgAGAAATCAA
AC RSP00881 Mean Expected Number 0.006 +strand +27 : +36 ATCAgCAACC
Totally 2 motifs of 2 different REs have been found
Description of REs found
113. Group TF: ATBP-1 /AC: RSP00115//OS: Pisum sativum /GENE: GS2/RE: BOX 1 /TF: ATBP-1
817. Group TF: Dof family /AC: RSP00881//OS: Hordeum vulgare /GENE: Al21/RE: M2 /TF: Dof family
Download This Page
Download Promoter Sequence in FASTA Format