> PLPR0195 ..AC:AF055898 ..OS:Zea mays ..GENE:alt ..PROD:alanine aminotransferase ..[ -200:  +51] ..CDS:+69 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.16   G -  0.25   T -  0.22   C -  0.37

      1  aaaccgcggc agtggtcggc ggccccccgg tctccttcca ctcgcttttc
     51  cggcgggcga ctggcctaaa atcgcctctt gtttgtttgc ttccgtcgtc
    101  ccctctccac gtagagcacg cccccggacc accttttata agcaccaacc
    151  atctggcctt gccgcgccga ttcgccacga agccgcactg tgagagaggg
    201  ACGCGGCCTG TTGTCCCGGC TTTTAGACGC AACTTCCATC GCTGCGAAGC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00040   Mean Expected Number 0.009   -strand   -114 : -120   AACAAAC
AC RSP00189   Mean Expected Number 0.006   +strand    -95 :  -86   TCCACGTAGa
AC RSP00280   Mean Expected Number 0.005   +strand    -95 :  -86   TCCACGTAGA
AC RSP01210   Mean Expected Number 0.002   +strand    -68 :  -59   CTTTTaTAAG
AC RSP01259   Mean Expected Number 0.004   -strand    -87 :  -94   CTACGTGG

  Totally       5 motifs of     5 different REs have been found


Description of REs found

   39. Group RE: AACA box (D) /AC: RSP00040//OS: Oryza sativa /GENE: GluB-1/RE: AACA box (D) /TF: unknown
  183. Group TF: ABI5 /AC: RSP00189//OS: Arabidopsis thaliana /GENE: AtEm1/RE: ABRE/1.3 /TF: ABI5
  271. Group TF: Opaque-1 /AC: RSP00280//OS: Zea mays /GENE: alpha-22kDa zein/RE: O2-box /TF: Opaque-1
 1120. Group RE: EM2 /Group TF: MADS box TFs /AC: RSP01210//OS: Lepidium africanum /GENE: LaCRC/RE: EM2 /TF: MADS box TFs
 1161. Group TF: GBF1 /AC: RSP01259//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS6 /TF: GBF1