> PLPR0196 ..AC:AF057708 ..OS:Populus balsamifera subsp. Trichocarpa ..GENE:PTD ..PROD:PTD protein ..[ -200:  +51] ..CDS:+134 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.30   G -  0.12   T -  0.30   C -  0.28

      1  ttacctaaca cagtcatgga acaggaatga gaaaaggtct tatcagtaaa
     51  ttgcttgcat gtcatgtcaa ggtgtatgaa cctcccaata cttctcacgc
    101  tacccttcag aaatCCAATc tcagaagcca cagacaatct aagttacgct
    151  acaatcaact ttccatcacc ctttccttat ttagaaactc cacttaatca
    201  CATTTCACCC TTTTTCATCA TCTTCTCTTT CCCTTCAAGA AGCCTAGGTA
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00080   Mean Expected Number 0.002   +strand    -29 :  -14   TTTCCTTATTTaGAAA
AC RSP00080   Mean Expected Number 0.002   -strand    -14 :  -29   TTTCtAAATAAGGAAA
AC RSP00085   Mean Expected Number 0.002   +strand    -29 :  -14   TTTCCtTATTTAGAAA
AC RSP00085   Mean Expected Number 0.002   -strand    -14 :  -29   TTTCTAAATAaGGAAA
AC RSP00107   Mean Expected Number 0.008   -strand   -140 : -146   CATGCAA
AC RSP00254   Mean Expected Number 0.004   -strand   -164 : -170   CCTTTTC
AC RSP00680   Mean Expected Number 0.007   +strand   -195 : -186   TAACAcAGTC

  Totally       7 motifs of     5 different REs have been found


Description of REs found

   79. Group TF: MADS-domain AGAMOUS BF /AC: RSP00080//OS: Arabidopsis thaliana /GENE: STE2; other genes/RE: AGAMOUS MADS BS /TF: MADS-domain AGAMOUS BF
   83. Group TF: AGL3 /AC: RSP00085//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: AGL3-BE /TF: AGL3
  105. Group RE: RY2 /AC: RSP00107//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY2 /TF: unknown
  247. Group RE: Py box /AC: RSP00254//OS: Hordeum vulgare /GENE: Amy pHV19/RE: Py box /TF: unknown ||Identical REs AC:  RSP00676
  649. Group RE: GARE/Box 2 /AC: RSP00680//OS: Hordeum vulgare /GENE: Amy32b/RE: GARE/Box 2 /TF: unknown