> PLPR0201 ..AC:AF192307 ..OS:Arabidopsis thaliana ..GENE:acyl-CoA binding protein 2 ..PROD:acyl-CoA binding protein 2 ..[ -200: +51] ..CDS:+241 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.31 G - 0.15 T - 0.35 C - 0.19
1 gaccacgatt ccaccacaaa atttgacatt gttattgaat tcattaactt
51 ttttacgtgt tattgtgaaa tatttattta attttgttgg taaaaggagc
101 aaaaaagatt agggtacaac acgtcgactt cttccCCAAT tagacccata
151 tgtgatctgt cgtcactcgt cgccaagttt ttttatgtgt cgtcttttaa
201 ACTTTGATCC AATTCATTAA AAAGTCTTAA CGCCCACAAC GAAAAGGAAC
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00254 Mean Expected Number 0.008 -strand +47 : +41 CCTTTTC
AC RSP00750 Mean Expected Number 0.004 +strand -141 : -130 TTATTGTgAAAT
AC RSP01261 Mean Expected Number 0.005 +strand -148 : -141 TTACGTGT
AC RSP01304 Mean Expected Number 0.002 -strand -83 : -92 TGtACCCTAA
Totally 4 motifs of 4 different REs have been found
Description of REs found
247. Group RE: Py box /AC: RSP00254//OS: Hordeum vulgare /GENE: Amy pHV19/RE: Py box /TF: unknown ||Identical REs AC: RSP00676
712. Group TF: GT-1 /AC: RSP00750//OS: Catharanthus roseus /GENE: STR/RE: BN rev /TF: GT-1
1163. Group TF: GBF1 /AC: RSP01261//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS8 /TF: GBF1
1197. Group RE: Telo box /AC: RSP01304//OS: Lycopersicon esculentum /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown
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