> PLPR0210 ..AC:X68831 ..OS:Antirrhinum majus ..GENE:globosa ..PROD:globosa ..[ -200: +51] ..CDS:+44 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.40 G - 0.12 T - 0.30 C - 0.18
1 gctagtaaca aaaaccaaaa tcacataaaa ttaaacgaat ttttttttta
51 acagttggct tgactttgac aatagaccat aaattccatt ttcgaactat
101 cttttgctgt tgtgtccgaa agtttgttgt cgcACAATcc cacaatagaa
151 aaatgccatt ataaccattc ctttttattc cagcatcatt tttacaatag
201 TTATCTGCAA ACAAAAACAA GAGAGAAAAA CAAAAACAAA AAAATGGGAA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00040 Mean Expected Number 0.009 -strand -73 : -79 AACAAAC
AC RSP00727 Mean Expected Number 0.004 +strand -143 : -137 GCTTGAC
AC RSP00850 Mean Expected Number 0.007 -strand -142 : -147 GCCAAC
Totally 3 motifs of 3 different REs have been found
Description of REs found
39. Group RE: AACA box (D) /AC: RSP00040//OS: Oryza sativa /GENE: GluB-1/RE: AACA box (D) /TF: unknown
690. Group RE: U-box /AC: RSP00727//OS: Nicotiana tabacum /GENE: Ubi.U4/RE: U-box /TF: unknown
790. Group RE: CAT /AC: RSP00850//OS: Zea mays /GENE: H4C7/RE: CAT /TF: unknown
Download This Page
Download Promoter Sequence in FASTA Format