> PLPR0211 ..AC:AJ224122 ..OS:Arabidopsis thaliana ..GENE:DAG1 ..PROD:DNA-binding protein ..[ -200: +51] ..CDS:+115 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.33 G - 0.12 T - 0.32 C - 0.23
1 cagaaaagaa ccagagaggg aggccatgag acattattat cactagtcaa
51 aaacaacaaa ccctcctttt gctttttcat ataaattatt atattttatt
101 ttgcaggttt cttctcttct tcttcttctt cttcttcttc ttcctcttgg
151 ctgctttctt tcatcatcca taaagtgaaa gctaacgcat agagagagcc
201 ATATCGTCCC AAAAAAAGCA AAAGTCCAAA AAAAAACAAC TCCAAAACAT
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00683 Mean Expected Number 0.004 -strand -50 : -59 GCCAAGaGGA
AC RSP00868 Mean Expected Number 0.009 +strand -114 : -103 TATTATATTtTA
AC RSP01209 Mean Expected Number 0.009 -strand +18 : +9 CTTTTTTTGG
AC RSP01601 Mean Expected Number 0.005 -strand -21 : -28 TTTCACTT
Totally 4 motifs of 4 different REs have been found
Description of REs found
652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
804. Group RE: TA-rich motif /AC: RSP00868//OS: Nicotiana tabacum /GENE: NiPMT1a/RE: TA-rich motif /TF: unknown
1119. Group RE: EM1 /Group TF: MADS box TFs /AC: RSP01209//OS: Lepidium africanum /GENE: LaCRC/RE: EM1 /TF: MADS box TFs
1422. Group RE: Inr /AC: RSP01601//OS: Spinacia oleracea /GENE: PsaDb/RE: Inr /TF: unknown
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