> PLPR0215 ..AC:X84315 ..OS:Arabidopsis thaliana ..GENE:GPRP ..PROD:GPRP ..[ -200: +51] ..CDS:+820 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.32 G - 0.15 T - 0.38 C - 0.15
1 tgttacatgt gtcgtccttc gtgctgaaaa tttggatagc attgttaatt
51 atgacaacgt aagtgtagcc tgtgattcat agtaaaatat aaggactaaa
101 aataaaaata tatctttttt ggaaatcgta ccgcgtaaga aacatgtata
151 aatacctata aggtcttatt tttttctctt ccaatttcgt ttcgacatat
201 TTCGCGATTC GTCTAAGGTA AAAAAAAACT CATCTTTTTT TCTTTTAGAT
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00125 Mean Expected Number 0.006 -strand -89 : -100 tATATTTTTATT
AC RSP01016 Mean Expected Number 0.007 +strand -63 : -56 AGAAACAT
AC RSP01469 Mean Expected Number 0.009 +strand -198 : -189 TtACATGTGT
AC RSP01733 Mean Expected Number 0.007 +strand -70 : -65 CCGCGT
Totally 4 motifs of 4 different REs have been found
Description of REs found
123. Group RE: AT-1 (3) /AC: RSP00125//OS: Nicotiana plumbaginifolia /GENE: cab-E/RE: AT-1 (3) /TF: unknown ||Identical REs AC: RSP00133 RSP00788
941. Group TF: AEF /AC: RSP01016//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 1 /TF: AEF
1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)
1541. Group TF: CAMTA3 /AC: RSP01733//OS: Arabidopsis thaliana /GENE: CBF2/RE: CM2 /TF: CAMTA3
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