> PLPR0217 ..AC:U48864 ..OS:Arabidopsis thaliana ..GENE:prha ..PROD:PRHA ..[ -200: +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.41 G - 0.19 T - 0.27 C - 0.14
1 gtctaattat atttcaaaaa gactcgtctc tattcataaa gattagattc
51 atgaatttca attcgcgatc gaaatggaaa cttatttttg gctaagaatg
101 taaaaggaaa acttagatAC AATatggaaa aatatgtcta aatacaggga
151 cttaaaatga aaataagtaa gagttgctgg agcattacca ttgccaaagt
201 AAAGTACCTA AAACGATGAA CGGAGAGTGA CGTAAACCCG ACCGTTGAAA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00112 Mean Expected Number 0.006 +strand +28 : +35 TGACGTAA
AC RSP00233 Mean Expected Number 0.007 -strand +36 : +27 TtTACGTCAC
Totally 2 motifs of 2 different REs have been found
Description of REs found
110. Group RE: TGA1 /AC: RSP00112//OS: Glycine max /GENE: GH3/RE: TGA1 /TF: unknown
226. Group RE: LS5 /Group TF: TGA2 & NPR1/NIM1 /AC: RSP00233//OS: Arabidopsis thaliana /GENE: PR-1/RE: LS5 /TF: TGA2 & NPR1/NIM1
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