> PLPR0224 ..AC:Y14608 ..OS:Chlamydomonas reinhardtii ..GENE:Csbp ..PROD:sedoheptulose-1,7-biphosphatase ..[ -200: +51] ..CDS:+142 ..TSS:201 (+1) |Taxon: Chlorophyta |Promoter: TATA-less
Nucleotide Frequencies: A - 0.21 G - 0.23 T - 0.25 C - 0.31
1 ttgacgattc gccaagctcc cggcaacccc cgcttgccca ttgcaaattc
51 ccaagtgtac tcccgtcctc gcggctttaa aatatggcag tccgtccggc
101 ttgaacatgc gcaagtcgca tttcccaacg ACAATcctct tcgtagcgcg
151 cacgttgcca ggcagcgaaa tattctatca tgtttttgct gggttgaatg
201 CAATTGAACA CCGGTTTGGT TTCGGCAGGC AGCTCCCCGA CCGTCAAGGC
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00866 Mean Expected Number 0.004 +strand -51 : -44 GCACGTTG
AC RSP01639 Mean Expected Number 0.006 -strand -65 : -74 GATTGTCGTT
Totally 2 motifs of 2 different REs have been found
Description of REs found
802. Group RE: G-box /AC: RSP00866//OS: Nicotiana tabacum /GENE: NiPMT1a/RE: G-box /TF: unknown
1459. Group RE: ARE /AC: RSP01639//OS: Nicotiana tabacum /GENE: PR-Q; ACS2/RE: ARE /TF: unknown
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