> PLPR0227 ..AC:X96502 ..OS:Chlamydomonas reinhardtii ..GENE:hsp70b ..PROD:heat shock protein 70B ..[ -200: +51] ..CDS:+111 ..TSS:201 (+1) |Taxon: Chlorophyta |Promoter: TATA-less
Nucleotide Frequencies: A - 0.24 G - 0.27 T - 0.19 C - 0.29
1 ttgcgcgagg aatcctgcgc tgcacacgct tccaagggag gccattggtc
51 aggcgataac gtgaggttgc tgaccagtga aatgtgcgtt accttagaag
101 tcagcgcgtt ccacacgacg gcctcggcat ggaacaacct agaaccccca
151 tgcaggctac ctgcagccac tagaagagca tgcttccgca tatgaccagg
201 ACGCTCTCGC TGCTGCAGGC ACTTGTCAAC GTGCGCAAGT GAACAATACT
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00056 Mean Expected Number 0.007 +strand +18 : +27 GgCACTTGTC
AC RSP00866 Mean Expected Number 0.005 -strand +34 : +27 GCACGTTG
Totally 2 motifs of 2 different REs have been found
Description of REs found
55. Group TF: ABI3 /AC: RSP00056//OS: Brassica napus /GENE: napA/RE: ABRE Bd /TF: ABI3
802. Group RE: G-box /AC: RSP00866//OS: Nicotiana tabacum /GENE: NiPMT1a/RE: G-box /TF: unknown
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