> PLPR0227 ..AC:X96502 ..OS:Chlamydomonas reinhardtii ..GENE:hsp70b ..PROD:heat shock protein 70B ..[ -200:  +51] ..CDS:+111 ..TSS:201 (+1) |Taxon: Chlorophyta |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.24   G -  0.27   T -  0.19   C -  0.29

      1  ttgcgcgagg aatcctgcgc tgcacacgct tccaagggag gccattggtc
     51  aggcgataac gtgaggttgc tgaccagtga aatgtgcgtt accttagaag
    101  tcagcgcgtt ccacacgacg gcctcggcat ggaacaacct agaaccccca
    151  tgcaggctac ctgcagccac tagaagagca tgcttccgca tatgaccagg
    201  ACGCTCTCGC TGCTGCAGGC ACTTGTCAAC GTGCGCAAGT GAACAATACT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00056   Mean Expected Number 0.007   +strand    +18 :  +27   GgCACTTGTC
AC RSP00866   Mean Expected Number 0.005   -strand    +34 :  +27   GCACGTTG

  Totally       2 motifs of     2 different REs have been found


Description of REs found

   55. Group TF: ABI3 /AC: RSP00056//OS: Brassica napus /GENE: napA/RE: ABRE Bd /TF: ABI3
  802. Group RE: G-box /AC: RSP00866//OS: Nicotiana tabacum /GENE: NiPMT1a/RE: G-box /TF: unknown

Download This Page
Download Promoter Sequence in FASTA Format