> PLPR0235 ..AC:X58253 ..OS:Lycopersicon esculentum ..GENE:ubi3 ..PROD:ubiquitin ..[ -200:  +51] ..CDS:+67 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.41   G -  0.17   T -  0.21   C -  0.22

      1  gacgcaccaa ttgatataga aaacgtaata ttgaaaacta atgtaaagaa
     51  aagtaacttg atcctaaact aatcaagata agcccaataa atatacattg
    101  tcatctccaa aggcccaaaa atggcacaag atggcaggcC CAATaacgaa
    151  gaaaagggct tgtaaaaccc taataaagtg gcactggcag agcttacact
    201  TTCATTCCAT CAACAAAAGA AACCCTAGAA GCCGCAGTGC CACTGATTTC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00279   Mean Expected Number 0.006   -strand    -28 :  -36   TTAGGGTTT
AC RSP00369   Mean Expected Number 0.006   +strand    -36 :  -28   AAACCCTAA
AC RSP01303   Mean Expected Number 0.009   +strand    -37 :  -28   aAAACCCTAA

  Totally       3 motifs of     3 different REs have been found


Description of REs found

  270. Group RE: inverted Telo box /AC: RSP00279//OS: Arabidopsis thaliana /GENE: A-p40/RE: inverted Telo box /TF: unknown ||Identical REs AC:  RSP00448
  354. Group RE: telo-box /AC: RSP00369//OS: Arabidopsis thaliana /GENE: eEF1AA1/RE: telo-box /TF: unknown
 1196. Group RE: Telo box /AC: RSP01303//OS: Arabidopsis thaliana /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown

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