> PLPR0236 ..AC:U40387 ..OS:Medicago sativa ..GENE:PO22 ..PROD:coil protein ..[ -200: +51] ..CDS:+66 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.27 G - 0.14 T - 0.40 C - 0.19
1 tacgtaaagg ttgataattc ttatgcacat tttgttgttt tattttttag
51 ctattcttag gcattttttt ctcccaggtg tttggtccaa aacatggtgt
101 ctttggcacc acaaagcatt aattcaagcg tgatccgtaa atacagcatg
151 aaacaaattc catttactct atttagatta gatttccttt catgtctttc
201 AACTCCATCC CATTTAACTT GTGACAAAAT TGTCATTGTA ACCTAAAGTT
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00036 Mean Expected Number 0.002 -strand -117 : -124 CAAACACC
AC RSP00773 Mean Expected Number 0.003 -strand -75 : -84 TGAATTAATG
AC RSP00778 Mean Expected Number 0.005 -strand -75 : -84 TGAATTAATG
AC RSP00894 Mean Expected Number 0.006 +strand -80 : -73 AATTCAAG
Totally 4 motifs of 4 different REs have been found
Description of REs found
35. Group TF: ABI3 /AC: RSP00036//OS: Brassica napus /GENE: napA/RE: ABRE Bp /TF: ABI3
729. Group RE: Box III /AC: RSP00773//OS: Brassica oleracea /GENE: SLR1/RE: Box III /TF: unknown
733. Group RE: Box III /AC: RSP00778//OS: Arabidopsis thaliana /GENE: AtS1/RE: Box III /TF: unknown
825. Group TF: Dof family /AC: RSP00894//OS: Solanum melongena /GENE: SmCP/RE: ERE 2 /TF: Dof family
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