> PLPR0241 ..AC:X77806 ..OS:Pyrenomonas salina ..GENE:histone H4 ..PROD:histone H4 ..[ -200:  +51] ..CDS:+79 ..TSS:201 (+1) |Taxon: Cryptophyta |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.27   G -  0.22   T -  0.22   C -  0.29

      1  gtcacttccg gtcgccattt ttgatttcgt ccgcttcggt ttgtggaaat
     51  agttaactga tccgaaccgc agcgtcttga cgtggagttg acatttcgat
    101  ttcgacagaa gagccaacga cgcagaggtc acgagcccca acccgaaccc
    151  acccgaaaaa acattatgaa cataccacgt tctccgtatc gaacttggta
    201  TGACATTTGG ACCAGCTAGC ACAGCCCACC CAACAAGAGA CGGCACAAGC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00018   Mean Expected Number 0.007   +strand   -184 : -178   ATTTTTG
AC RSP00214   Mean Expected Number 0.002   +strand   -123 : -116   TGACGTGG
AC RSP00215   Mean Expected Number 0.002   -strand   -116 : -123   CCACGTCA
AC RSP00646   Mean Expected Number 0.000   -strand   -173 : -186   GAAATcAAAAATGG
AC RSP01115   Mean Expected Number 0.007   -strand   -178 : -184   CAAAAAT
AC RSP01275   Mean Expected Number 0.003   -strand   -115 : -124   TCCACGTCAa
AC RSP01757   Mean Expected Number 0.003   -strand   -120 : -127   GTCAAGAC

  Totally       7 motifs of     7 different REs have been found


Description of REs found

   17. Group TF: SEF4 /AC: RSP00018//OS: Glycine max /GENE: beta-conglycinin/RE: SEF4 /TF: SEF4
  207. Group TF: TGA1; GBF1 /AC: RSP00214//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: Hex motif /TF: TGA1; GBF1 ||Identical REs AC:  RSP01257  RSP01474
  208. Group TF: HBP-11(17); HBP-1b(c38) /AC: RSP00215//OS: Triticum aestivum /GENE: H3/RE: Hex /TF: HBP-11(17); HBP-1b(c38)
  620. Group RE: C1-box /AC: RSP00646//OS: Daucus carota /GENE: DC 59/RE: C1-box /TF: unknown
 1034. Group RE: CCAAT box-like motif 2 /AC: RSP01115//OS: Agrobacterium tumefaciens /GENE: ags/RE: CCAAT box-like motif 2 /TF: unknown
 1174. Group RE: ACE 2 /AC: RSP01275//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 2 /TF: unknown
 1562. Group TF: B /AC: RSP01757//OS: Glycine max /GENE: a2/RE: BBS /TF: B