> PLPR0253 ..AC:Z54358 ..OS:Zea mays ..GENE:cat2 ..PROD:cat2 ..[ -200:  +51] ..CDS+1165 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.18   G -  0.27   T -  0.20   C -  0.34

      1  cttcgctagg cttatccggc aacaaacaaa acctgcgctt tttttttctg
     51  gaggacggcg cgcgccggtg agcgtgtgga tgaggcgcgg cctacagcag
    101  aacccaccca gtcgagggca aaaagagcct cctcccccgt cactcgttgc
    151  tccggcTATA TATAacgacc ggcgctatcc gtgtcgcagc ctcctcgcag
    201  GTGACCTTGC GTACGTACGT CGTAGCGGCT CGTCCAGCTC GCTCGCCACC
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00040   Mean Expected Number 0.006   +strand   -180 : -174   AACAAAC
AC RSP00146   Mean Expected Number 0.002   -strand    -36 :  -42   TTATATA
AC RSP00379   Mean Expected Number 0.009   -strand    -20 :  -29   CGGATAGcGC
AC RSP01174   Mean Expected Number 0.008   +strand    -70 :  -60   CCTCcCCCGTC

  Totally       4 motifs of     4 different REs have been found


Description of REs found

   39. Group RE: AACA box (D) /AC: RSP00040//OS: Oryza sativa /GENE: GluB-1/RE: AACA box (D) /TF: unknown
  142. Group RE: TATA1 /AC: RSP00146//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: TATA1 /TF: unknown
  364. Group RE: LS7 /AC: RSP00379//OS: Lemna gibba /GENE: Lhcb2 (cabAB19)/RE: LS7 /TF: unknown
 1085. Group TF: Zmhox1a /AC: RSP01174//OS: Zea mays /GENE: Sh/RE: Zmhox1a BS 1 /TF: Zmhox1a

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