> PLPR0255 ..AC:AJ276878, X02982 X00634 ..OS:Pisum sativum ..GENE:legA ..PROD:legumin ..[ -200:  +51] ..CDS:+25 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.25   G -  0.13   T -  0.32   C -  0.29

      1  ctttgtctgg taatggagat gatgaagcca ttagccacct cctctatcag
     51  acataggtgt aaagcattat gcttccatag ccatgcaagc tgcagaatgt
    101  CCAATtctca acatcccact ttcaatgacg tgtccaacct tcaccaccct
    151  ctcttctcTA TAAATTacca cttctcatta aggttctccg catcacaacc
    201  AACATTCTCT TAGTATCTCT CTTCATGGCT AAGCTTCTTG CACTTTCTCT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00132   Mean Expected Number 0.006   +strand   -167 : -160   GCCACCTC
AC RSP00232   Mean Expected Number 0.008   -strand    -70 :  -79   ACGTCATtGA
AC RSP00394   Mean Expected Number 0.007   +strand   -143 : -137   TGTAAAG
AC RSP00460   Mean Expected Number 0.004   -strand    -67 :  -76   GACAcGTCAT
AC RSP01035   Mean Expected Number 0.010   +strand    -73 :  -67   ACGTGTC
AC RSP01172   Mean Expected Number 0.000   +strand   -127 : -102   TCCATAGCCATGCAAGCTGCAGAATG
AC RSP01258   Mean Expected Number 0.001   +strand    -75 :  -68   TGACGTGT
AC RSP01654   Mean Expected Number 0.003   +strand    -77 :  -68   AATGACGTGT

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  130. Group TF: ROM1; ROM2 /AC: RSP00132//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: vicilin box /TF: ROM1; ROM2
  225. Group RE: LS7 /Group TF: TGA2 & NPR1/NIM1 /AC: RSP00232//OS: Arabidopsis thaliana /GENE: PR-1/RE: LS7 /TF: TGA2 & NPR1/NIM1
  377. Group TF: PBF-1 /AC: RSP00394//OS: Zea mays /GENE: gamma-27kDa zein/RE: P-box (s) /TF: PBF-1 ||Identical REs AC:  RSP00396  RSP00429  RSP01402
  438. Group TF: O2 /AC: RSP00460//OS: coix /GENE: alpha-coixin/RE: O2d /TF: O2
  960. Group TF: ABI3; ABI5; AREB1 /AC: RSP01035//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 3 /TF: ABI3; ABI5; AREB1
 1083. Group RE: CATGCATG-like motif /AC: RSP01172//OS: Pisum sativum /GENE: PsLegA/RE: CATGCATG-like motif /TF: unknown
 1160. Group TF: GBF1 /AC: RSP01258//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS5 /TF: GBF1
 1472. Group TF: STF1/HY5 /AC: RSP01654//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: STF1/HY5 BS (cons) /TF: STF1/HY5