> PLPR0258 ..AC:AB002467 ..OS:Spinacia oleracea ..GENE:APX2 ..PROD:thylakoid-bound ascorbate peroxidase ..[ -200: +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.27 G - 0.22 T - 0.25 C - 0.26
1 caaaacacac taaatttact aaaattaatc ctagacaaga cggtttggcc
51 ccactcagta tgagggtata tgtgggcttg ggcccaatct ttagtttttc
101 agcccgacCC AATtaggtca gtttcaaaca aacttgacat gggccgagac
151 cgtttatacc cacaatccat gggctcagtc tgaaatctga cctggtctcc
201 ACTCGGCATA AGGGTATGTG GGCTTGGGCC AACCCGACCC AACTTGATCA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00079 Mean Expected Number 0.003 -strand +22 : +13 CCCACaTACC
AC RSP00683 Mean Expected Number 0.007 -strand +7 : -3 GCCgAGTGGA
AC RSP00934 Mean Expected Number 0.008 +strand -114 : -105 ATcTTTAGTT
Totally 3 motifs of 3 different REs have been found
Description of REs found
78. Group RE: AC-I /AC: RSP00079//OS: Phaseolus vulgaris /GENE: PAL2/RE: AC-I /TF: unknown ||Identical REs AC: RSP00420
652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
863. Group RE: AT-2b /AC: RSP00934//OS: Pinus sylvestris /GENE: GS1a/RE: AT-2b /TF: unknown
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