> PLPR0263 ..AC:X89216 ..OS:Arabidopsis thaliana ..GENE:103-1a ..PROD:glutathione transferase ..[ -200: +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.39 G - 0.16 T - 0.24 C - 0.21
1 ttgtataggg aacgttataa atatgttgta aagtcaacat ctgtttcctt
51 ctagactctt cgcatttaca tcacactgcc gaccatataa aacggcaaag
101 ttcgtcgtcg ttttatcaca agaccatcaa caccataagg ctataaatcc
151 aagctaaaag gtagtgatta actccacaaa accagaaaaa ctacatttct
201 AACATATAGA AGAAACAGAG AAAAAGAGAG AGAGACCCCT AATGGCTGAG
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00495 Mean Expected Number 0.005 +strand -174 : -167 TGTAAAGT
AC RSP00864 Mean Expected Number 0.001 +strand +25 : +33 AGAGAGAGA
AC RSP00864 Mean Expected Number 0.001 +strand +27 : +35 AGAGAGAGA
AC RSP00918 Mean Expected Number 0.008 -strand -163 : -172 GTTGACTTTA
Totally 4 motifs of 3 different REs have been found
Description of REs found
471. Group RE: P-box 2 /AC: RSP00495//OS: Triticum aestivum /GENE: LMW-glutenin/RE: P-box 2 /TF: unknown ||Identical REs AC: RSP00686
800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
849. Group TF: Opaque-2 /AC: RSP00918//OS: Zea mays /GENE: O2/RE: B5-like motif /TF: Opaque-2
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