> PLPR0264 ..AC:X58339 ..OS:Hordeum vulgare ..GENE:CHS ..PROD:chalcone synthase ..[ -200:  +51] ..TSS+1857 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.20   G -  0.20   T -  0.22   C -  0.39

      1  ggcggattgg ttggtagcaa tggtaatggt aaggtagacg tgtcgctcgc
     51  gcccccatct ccccaccccg cagtcgtggc catccatcct cccgtcaatg
    101  gacctaaccc gctcctccca acggccagct ttcgcttcct tacccacctt
    151  tcccgccTAT ATATCccgtc ctcatactca tggcaccaca ccacaccgta
    201  CACACGCAGC ATCTCACATT TGTCTCGCAG CACAGACGTC ACACGGAGCC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00103   Mean Expected Number 0.007   +strand    +30 :  +39   GCACAgACGT
AC RSP00377   Mean Expected Number 0.001   -strand   -189 : -198   AACCAATCCg
AC RSP00489   Mean Expected Number 0.001   -strand   -185 : -194   TACCaACCAA
AC RSP01236   Mean Expected Number 0.004   +strand    -29 :  -20   TCATAcTCAT
AC RSP01454   Mean Expected Number 0.004   -strand   -186 : -192   ACCAACC
AC RSP01469   Mean Expected Number 0.004   +strand    +14 :  +23   TCACATtTGT

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  101. Group RE: Z element /AC: RSP00103//OS: Agrobacterium tumefaciens /GENE: nos/RE: Z element /TF: unknown
  362. Group RE: LS5 /AC: RSP00377//OS: Lemna gibba /GENE: Lhcb2 (cabAB19)/RE: LS5 /TF: unknown
  465. Group RE: UVLRE2 /AC: RSP00489//OS: Glycine max /GENE: chs1/RE: UVLRE2 /TF: unknown
 1141. Group RE: 10 bp Z-BAC- /AC: RSP01236//OS: Phaseolus vulgaris /GENE: BAC/RE: 10 bp Z-BAC- /TF: unknown
 1325. Group RE: AC-II /Group TF: PtMYB4 /AC: RSP01454//OS: Pinus taeda /GENE: Synthetic OLIGO/RE: AC-II /TF: PtMYB4
 1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)