> PLPR0265 ..AC:Y11038 ..OS:Beta vulgaris ..GENE:BV-70/5 ..PROD:V-ATPase, A subunit ..[ -200: +51] ..CDS:+232 ..TSS+1074 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.36 G - 0.12 T - 0.28 C - 0.24
1 aaccatattt ttaatttagt taaacctctc aagtctcact acattcttaa
51 aaaaagttgg agatagagtc atcataattc atagagaagg aattgacaac
101 atctaataag aacgaattac gaacgtggca aaatcacaga cgaaacatag
151 caaaacttaa ccctgcaaat ctcaatcaga tttaaataat ccttttgctg
201 ATTGGTCTGT CACTTCCACC ACATCTTTTG TCGTATCACC CCACCCCTCC
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00231 Mean Expected Number 0.004 -strand +5 : -2 CCAATCA
AC RSP01034 Mean Expected Number 0.003 +strand -78 : -72 ACGTGGC
AC RSP01509 Mean Expected Number 0.000 -strand +6 : -3 ACCAATCAG
AC RSP01602 Mean Expected Number 0.009 +strand -31 : -24 TCTCAATC
Totally 4 motifs of 4 different REs have been found
Description of REs found
224. Group RE: CCAAT box 1 /AC: RSP00231//OS: Arabidopsis thaliana /GENE: AGAMAOUS (AG)/RE: CCAAT box 1 /TF: unknown
959. Group TF: ABI3; ABI5; AREB1 /AC: RSP01034//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 1/2 /TF: ABI3; ABI5; AREB1
1364. Group RE: CCAAT box /AC: RSP01509//OS: Triticum aestivum /GENE: H1 (TH315)/RE: CCAAT box /TF: unknown ||Identical REs AC: RSP01510
1423. Group RE: Inr /AC: RSP01602//OS: Spinacia oleracea /GENE: PsaDb/RE: Inr /TF: unknown
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