> PLPR0271 ..AC:X54046 ..OS:Oryza sativa ..GENE:PCNA ..PROD:proliferating cell nuclear antigen ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.15   G -  0.19   T -  0.24   C -  0.42

      1  caggtgggcc cgtactccac catggtccca catgtcagct gaatcttcca
     51  ctgcaagaag cgggaaacat ttcgggtgga ggcgggtttc cccccaattt
    101  ctccctccat ttttttttcg tctcgcgtcc cccaaacccc tccctattaa
    151  tctccccctt ccccctttct tcccctcgcc gccgcctcct cctcccaaac
    201  CCCACAAGCG AATCCTAGGG TTTCTCGCCT CGCCGCCGCA TCGCCGCCGG
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00015   Mean Expected Number 0.000   -strand   -134 : -141   TTTCCCGC
AC RSP00095   Mean Expected Number 0.001   +strand   -197 : -189   GTGGGCCCG
AC RSP00292   Mean Expected Number 0.000   +strand   -196 : -169   TGGGCCCGT-- +9 bp --TGGTCCCACA
AC RSP00303   Mean Expected Number 0.000   +strand   -199 : -188   AGGTGGGCCCGT
AC RSP00306   Mean Expected Number 0.001   -strand   -169 : -180   TGTGGGACCATG
AC RSP00713   Mean Expected Number 0.008   +strand   -165 : -159   CAGCTGA
AC RSP00292   Mean Expected Number 0.000   +strand   -178 :  +22   TGGTCCCACA-- ** bp --TAGGGTTT

  Totally       7 motifs of     7 different REs have been found


Description of REs found

   14. Group TF: E2F1 /AC: RSP00015//OS: Arabidopsis thaliana /GENE: AtCDC6/RE: E2F1-BE /TF: E2F1 ||Identical REs AC:  RSP00165  RSP00298
   93. Group TF: GCBP-2 /AC: RSP00095//OS: Zea mays /GENE: GapC4/RE: GCBP-2 BS /TF: GCBP-2
  283. Group RE: IIa-IIb /AC: RSP00292//OS: Oryza sativa /GENE: PCNA/RE: IIa-IIb /TF: unknown ||Identical REs AC:  RSP00300
  290. Group TF: PCF1; PCF2 /AC: RSP00303//OS: Oryza sativa /GENE: PCNA/RE: IIa /TF: PCF1; PCF2
  293. Group TF: PCF1; PCF2 /AC: RSP00306//OS: Oryza sativa /GENE: PCNA/RE: IIb /TF: PCF1; PCF2
  679. Group TF: MYC /AC: RSP00713//OS: Hordeum vulgare /GENE: HvLTP2/RE: MYC RS /TF: MYC
  924. Group RE: IIb-telo /AC: RSP00292//OS: Oryza sativa /GENE: PCNA/RE: IIb-telo /TF: unknown