> PLPR0275 ..AC:M16991 ..OS:Triticum aestivum ..GENE:Amy3 ..PROD:alpha-amylase 3 ..[ -200:  +51] ..CDS:+57 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.32   G -  0.21   T -  0.25   C -  0.22

      1  cggcagtaat taatagacaa aactttagct cctaatccat tttatctcag
     51  aagccagcgg tccttatcca tgcggatatc tttggagaaa aattaaggag
    101  aATTGAtagt ttttactagg cacctactaa tctctaagct ccaagtacct
    151  ataaatacaa gcgagctcaa gcattgccaa accaaggagt agtcgtcggt
    201  CCAGGAGTCC AGATTTCATA GGAAGTAGAG GCGAGCTGCA CTGCAGACTG
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00509   Mean Expected Number 0.001   +strand    -51 :  -40   TATAAATACaAG
AC RSP01296   Mean Expected Number 0.003   +strand    -52 :  -44   CTATAAATA
AC RSP01301   Mean Expected Number 0.001   +strand    -52 :  -43   CTATAAATAC

  Totally       3 motifs of     3 different REs have been found


Description of REs found

  485. Group RE: TATA box /AC: RSP00509//OS: Avena fatua /GENE: alpha-Amy2/A/RE: TATA box /TF: unknown
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302