> PLPR0279 ..AC:M28158 ..OS:Oryza sativa ..GENE:GT3 ..PROD:glutelin 1, seed storage protein ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.34   G -  0.11   T -  0.31   C -  0.24

      1  ataaaagcaa agaaaaggat atcaaacaga ccattgtgca tcccattgat
     51  ccttgtatgt ctatttatct atcctccttt tgtgtacctt acttctatct
    101  agtgagtcac ttcatatgtg gacattaaca aactctatct taacatctag
    151  tcgatcacta ctttacttca cTATAAAAGg accaacatat atcatccatt
    201  TCTCACAAAA GCATTGAGTT CAGTCCCACA AAAACATGGC AACCATCAAA
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00190   Mean Expected Number 0.008   +strand    -98 :  -92   TGAGTCA
AC RSP00192   Mean Expected Number 0.004   +strand    -75 :  -64   TAACAAACTCTA
AC RSP00194   Mean Expected Number 0.000   +strand   -105 :  -87   TATCTAGTGAGTCACTTCA
AC RSP00196   Mean Expected Number 0.000   +strand   -124 : -110   CTTTTGTGTACCTTA
AC RSP00254   Mean Expected Number 0.005   -strand   -183 : -189   CCTTTTC
AC RSP00447   Mean Expected Number 0.006   +strand   -195 : -186   AGCAAAGaAA
AC RSP00694   Mean Expected Number 0.001   +strand    -74 :  -62   AACAAACTCTATC
AC RSP01061   Mean Expected Number 0.000   +strand    -99 :  -91   GTGAGTCAC

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  184. Group RE: GCN4 box /AC: RSP00190//OS: Oryza sativa /GENE: GluB-1/RE: GCN4 box /TF: unknown ||Identical REs AC:  RSP00666  RSP00959
  185. Group RE: AACA motif /AC: RSP00192//OS: Oryza sativa /GENE: Gt3/RE: AACA motif /TF: unknown
  187. Group RE: Box I /AC: RSP00194//OS: Oryza sativa /GENE: Gt3/RE: Box I /TF: unknown
  189. Group RE: Box II /AC: RSP00196//OS: Oryza sativa /GENE: Gt3/RE: Box II /TF: unknown
  247. Group RE: Py box /AC: RSP00254//OS: Hordeum vulgare /GENE: Amy pHV19/RE: Py box /TF: unknown ||Identical REs AC:  RSP00676
  427. Group TF: Dof1 /AC: RSP00447//OS: Zea mays /GENE: pepcZm2A/RE: box b /TF: Dof1
  660. Group RE: AACAA motif /AC: RSP00694//OS: Oryza sativa /GENE: Gt1/RE: AACAA motif /TF: unknown ||Identical REs AC:  RSP01062
  981. Group TF: Hahb-4 /AC: RSP01061//OS: Oryza sativa /GENE: GluA-3/RE: GCN4 motif /TF: Hahb-4