> PLPR0281 ..AC:M64682 ..OS:Spinacia oleracea ..GENE:GT3 ..PROD:nuclear-encoded plastid ribosomal protein L21 ..[ -200: +51] ..CDS:+52 ..TSS:201 (+1) ..NOTE: Promoter P2 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.35 G - 0.17 T - 0.24 C - 0.24
1 agtggcactt ctagttctag ttaccaatcc aaatggacaa atggtattat
51 ggtacataac ccaaatggta ttatccaacc tgaacaagtc gaacaacccg
101 tttaacaaaa actcgagggg ctaaagttgt catttgagcc aaaccggata
151 ggatagagtg ataaaccccc gactccagca acaagagcta aaaggaacac
201 CTCTTCTTCC TCCTCTCTAT CTCTCTCACA GAGTTTAGAG CTAAACTAAA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00332 Mean Expected Number 0.003 +strand -160 : -153 ATGGTATT
AC RSP00332 Mean Expected Number 0.003 +strand -136 : -129 ATGGTATT
AC RSP01013 Mean Expected Number 0.007 +strand -171 : -162 CAAATGGAcA
AC RSP01477 Mean Expected Number 0.000 +strand -88 : -64 TCGAGGGGCTAAAGTTGTCATTTGA
AC RSP01598 Mean Expected Number 0.003 +strand -73 : -66 TGTCATTT
AC RSP01639 Mean Expected Number 0.005 +strand -76 : -67 AGTTGTCATT
Totally 6 motifs of 5 different REs have been found
Description of REs found
318. Group TF: S1F /AC: RSP00332//OS: Spinacia oleracea /GENE: RPL21/RE: S1 /TF: S1F
938. Group TF: GAPF /AC: RSP01013//OS: Arabidopsis thaliana /GENE: GapA/RE: Gap box 1 /TF: GAPF
1345. Group RE: BC-1 /AC: RSP01477//OS: Spinacia oleracea /GENE: RPL21/RE: BC-1 /TF: unknown
1419. Group RE: Inr /AC: RSP01598//OS: Spinacia oleracea /GENE: RPL21/RE: Inr /TF: unknown
1459. Group RE: ARE /AC: RSP01639//OS: Nicotiana tabacum /GENE: PR-Q; ACS2/RE: ARE /TF: unknown
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