> PLPR0289 ..AC:U30729 NM_115294 ..OS:Arabidopsis thaliana ..GENE:APETALA3 (AP3) ..PROD:floral homeotic protein ..[ -200:  +51] ..CDS:+37 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.31   G -  0.11   T -  0.36   C -  0.22

      1  cttgtaatta aaaaaatcag tttacataaa tggaaaattt atcacttagt
     51  tttcatcaac ttctgaactt acctttcatg gattaggcaa tactttccat
    101  ttttagtaac tcaagtggac cctttacttc ttcaactcca tctctctctt
    151  tctatttcac ttctttcttc tcattatatc tcttgtcctc tccaccaaat
    201  CTCTTCAACA AAAAGATTAA ACAAAGAGAG AAGAATATGG CGAGAGGGAA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00080   Mean Expected Number 0.004   +strand   -180 : -165   TTTaCATAAATGGAAA
AC RSP00080   Mean Expected Number 0.004   +strand   -107 :  -92   TTTCCATTTTTaGTAA
AC RSP00080   Mean Expected Number 0.004   -strand    -92 : -107   TTACtAAAAATGGAAA
AC RSP00080   Mean Expected Number 0.004   -strand   -165 : -180   TTTCCATTTATGtAAA
AC RSP00085   Mean Expected Number 0.005   +strand   -180 : -165   TTTaCATAAATGGAAA
AC RSP00085   Mean Expected Number 0.005   +strand   -107 :  -92   TTTCCATTTTTAGTAA
AC RSP00085   Mean Expected Number 0.005   -strand    -92 : -107   TTACTAAAAATGGAAA
AC RSP00085   Mean Expected Number 0.005   -strand   -165 : -180   TTTCCATTTATGtAAA
AC RSP00136   Mean Expected Number 0.000   +strand   -181 : -164   GTTTACATAAATGGAAAA
AC RSP00137   Mean Expected Number 0.000   +strand   -133 : -116   CTTACCTTTCATGGATTA
AC RSP00445   Mean Expected Number 0.006   +strand    +20 :  +29   AAcAAAGAGA
AC RSP00522   Mean Expected Number 0.003   -strand    -83 :  -89   CCACTTG
AC RSP00861   Mean Expected Number 0.005   -strand    -48 :  -56   AGAAAGAGA
AC RSP00864   Mean Expected Number 0.003   -strand    -52 :  -60   AGAGAGAGA

  Totally      14 motifs of     8 different REs have been found


Description of REs found

   79. Group TF: MADS-domain AGAMOUS BF /AC: RSP00080//OS: Arabidopsis thaliana /GENE: STE2; other genes/RE: AGAMOUS MADS BS /TF: MADS-domain AGAMOUS BF
   83. Group TF: AGL3 /AC: RSP00085//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: AGL3-BE /TF: AGL3
  132. Group TF: AP3/PI /AC: RSP00136//OS: Arabidopsis thaliana /GENE: AP3/RE: CArG1 /TF: AP3/PI
  133. Group TF: AP3/PI /AC: RSP00137//OS: Arabidopsis thaliana /GENE: AP3/RE: CArG2 /TF: AP3/PI
  425. Group TF: Dof1 /AC: RSP00445//OS: Zea mays /GENE: cyPPDK1/RE: box e /TF: Dof1
  498. Group TF: DPBF-1; DPBF-2 /AC: RSP00522//OS: Daucus carota /GENE: Dc3/RE: E2-core /TF: DPBF-1; DPBF-2
  797. Group TF: BPC1 /AC: RSP00861//OS: Arabidopsis thaliana /GENE: STK/RE: GA-2 /TF: BPC1
  800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1