> PLPR0296 ..AC:U76610 ..OS:Solanum tuberosum ..GENE:ci21A ..PROD:ci21A, cold inducible protein ..[ -200:  +51]..CDS:+89 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.37   G -  0.11   T -  0.38   C -  0.14

      1  taatttaacc ctaaaagtta gctcaataat ttaataattt cactcatttt
     51  ttatattgtt gtcttgtcat tatctttagg taataatagt gtaaaaatta
    101  ttttacacga ttaaactaca taaattatAC AATagttgat atgactacca
    151  aagtgccacc tcatggcaca ataatttaat ttggactatt agtgaatgaa
    201  TGAGTTTTAA TTATAAATAG AGCACTTGAC AAGATCATAT TTCTATCAAA
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00132   Mean Expected Number 0.000   +strand    -46 :  -39   GCCACCTC
AC RSP00778   Mean Expected Number 0.004   +strand     -8 :   +2   TGAATGAATG
AC RSP00847   Mean Expected Number 0.001   +strand    -45 :  -36   CCACCTCATg
AC RSP00996   Mean Expected Number 0.003   +strand    -66 :  -57   GTTGATATGA
AC RSP01303   Mean Expected Number 0.004   +strand   -196 : -187   TtAACCCTAA
AC RSP01304   Mean Expected Number 0.002   +strand   -196 : -187   TtAACCCTAA

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  130. Group TF: ROM1; ROM2 /AC: RSP00132//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: vicilin box /TF: ROM1; ROM2
  733. Group RE: Box III /AC: RSP00778//OS: Arabidopsis thaliana /GENE: AtS1/RE: Box III /TF: unknown
  789. Group RE: NON /AC: RSP00847//OS: Zea mays /GENE: H3C4/RE: NON /TF: unknown
  917. Group TF: Opaque-2 (O2) /AC: RSP00996//OS: Zea mays /GENE: cyPPDK1/RE: O2 BS-1 /TF: Opaque-2 (O2)
 1196. Group RE: Telo box /AC: RSP01303//OS: Arabidopsis thaliana /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown
 1197. Group RE: Telo box /AC: RSP01304//OS: Lycopersicon esculentum /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown