> PLPR0297 ..AC:M95172 ..OS:Hordeum vulgare ..GENE:Kas12 ..PROD:beta-ketoacyl-acyl carrier protein (ACP) synthase I ..[ -200:  +51] ..CDS:+169 ..TSS:201 (+1) # Alternative TSS(s): -3,-2,-1 |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.30   G -  0.09   T -  0.31   C -  0.29

      1  aacaaatcag ttgatctaat attttttcag tcaactgatc catgccaggc
     51  ccttattttc ctccatttga aatctagcat gtttctcttc caaaaagatg
    101  tactcctatt ttttataccg ctcaaaaaaa aacctcctat ttttcataaa
    151  cacgcagtag taactgaaag cgacagttct gatttctgcc cctcccaatc
    201  CAATCCACAA TAAACCTCTC CCTCCAAAAA TCCATCCATC CATCTTTCCG
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00385   Mean Expected Number 0.006   -strand   -128 : -135   ATTTCAAA
AC RSP00988   Mean Expected Number 0.001   +strand    +18 :  +29   CTCCCtCCAAAA
AC RSP00996   Mean Expected Number 0.001   +strand   -191 : -182   GTTGATCTAA
AC RSP01016   Mean Expected Number 0.006   -strand   -115 : -122   AGAAACAT
AC RSP01081   Mean Expected Number 0.003   +strand    +31 :  +42   TCCAtCCATCCA
AC RSP01127   Mean Expected Number 0.002   +strand    -46 :  -29   CAGT-- ** bp --AGCG
AC RSP01195   Mean Expected Number 0.001   +strand   -183 : -171   AATATTTTTTCaG
AC RSP01599   Mean Expected Number 0.006   -strand   -129 : -136   TTTCAAAT

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  370. Group RE: ERE-core /AC: RSP00385//OS: Dianthus caryophillus /GENE: GST1/RE: ERE-core /TF: unknown ||Identical REs AC:  RSP00893
  909. Group TF: E2F/DP /AC: RSP00988//OS: Zea mays /GENE: RBR3/RE: E2F/DP I /TF: E2F/DP
  917. Group TF: Opaque-2 (O2) /AC: RSP00996//OS: Zea mays /GENE: cyPPDK1/RE: O2 BS-1 /TF: Opaque-2 (O2)
  941. Group TF: AEF /AC: RSP01016//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 1 /TF: AEF
  999. Group TF: DcMYB1 /AC: RSP01081//OS: Daucus carota /GENE: DcPAL1/RE: box-L3 /TF: DcMYB1
 1046. Group TF: ZPT2-2 /AC: RSP01127//OS: Petunia hybrida /GENE: Synthetic OLIGO/RE: ZPT2-2 BS 1 /TF: ZPT2-2
 1106. Group RE: Region II /AC: RSP01195//OS: Zea mays /GENE: cab-ml/RE: Region II /TF: unknown
 1420. Group RE: Inr /AC: RSP01599//OS: Spinacia oleracea /GENE: RPS1/RE: Inr /TF: unknown