> PLPR0298 ..AC:U17436 ..OS:Medicago sativa ..GENE:IFR ..PROD:isoflavone reductase ..[ -200: +51] ..CDS:+93 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.39 G - 0.16 T - 0.28 C - 0.17
1 ctactaatat gttttatacg gagttaatta agtagactta agagaaggcg
51 tcaattttga ccaacagggc tgcttctatt tcaacaacaa tgaatattaa
101 atttggtcac taaaacacac agagagtagt agatggATTG Aagttggtgg
151 caatccaagt ttgtccTATA AATAtcaaac aaagtatagc tattcatcac
201 ACACTCACTA CTACTTTGGT AACGTATTCA AAACAAGAAA AAACAGACAA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00383 Mean Expected Number 0.009 -strand -139 : -145 GGTCAAA
AC RSP00654 Mean Expected Number 0.002 -strand -52 : -61 CACCaACTTC
AC RSP01296 Mean Expected Number 0.008 +strand -35 : -27 CTATAAATA
Totally 3 motifs of 3 different REs have been found
Description of REs found
368. Group TF: WRKY1 /AC: RSP00383//OS: Petroselinum crispum /GENE: WRKY1/RE: WA /TF: WRKY1
628. Group RE: CT-B /AC: RSP00654//OS: Spinacia oleracea /GENE: PetH/RE: CT-B /TF: unknown
1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
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