> PLPR0301 ..AC:X73535 ..OS:Arabidopsis thaliana ..GENE:hemC ..PROD:hydroxymethylbilane synthase ..[ -200:  +51]..CDS:+104 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.31   G -  0.16   T -  0.31   C -  0.22

      1  ttgggctaag cccttgataa tacttacttt ccggcccaat aaaagataaa
     51  tcgacgagat tgcgaaacag acggtgatta aggtagtaga acaccataat
    101  ctggtatgag tcattcgtag aggaataaag ctctaaaatc taattatcct
    151  atccaatatc ctctcataga ggtgagagct aagattttcc catcaactcc
    201  ATTTGAAGCG AAATTCTCTG ATCTCTCTTC ATTTTATTTT CCCTCTACAT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00664   Mean Expected Number 0.001   +strand    -95 :  -87   ATGAGTCAT
AC RSP01013   Mean Expected Number 0.007   -strand     +5 :   -5   CAAATGGAGt
AC RSP01014   Mean Expected Number 0.009   -strand    +35 :  +26   aAAATGAAGA
AC RSP01209   Mean Expected Number 0.008   -strand   -156 : -165   CTTTTaTTGG
AC RSP01278   Mean Expected Number 0.003   +strand    -95 :  -87   ATGAGTCAT
AC RSP01278   Mean Expected Number 0.003   -strand    -87 :  -95   ATGACTCAT

  Totally       6 motifs of     5 different REs have been found


Description of REs found

  636. Group RE: C-box /Group TF: Opaque-2 (O2); TGA1 /AC: RSP00664//OS: Pisum sativum /GENE: psl/RE: C-box /TF: Opaque-2 (O2); TGA1 ||Identical REs AC:  RSP00687
  938. Group TF: GAPF /AC: RSP01013//OS: Arabidopsis thaliana /GENE: GapA/RE: Gap box 1 /TF: GAPF
  939. Group TF: GAPF /AC: RSP01014//OS: Arabidopsis thaliana /GENE: GapA/RE: Gap box 2 /TF: GAPF
 1119. Group RE: EM1 /Group TF: MADS box TFs /AC: RSP01209//OS: Lepidium africanum /GENE: LaCRC/RE: EM1 /TF: MADS box TFs
 1177. Group TF: AP1/GCN4 /AC: RSP01278//OS: Nicotiana tabacum /GENE: Synthetic OLIGO/RE: B consensus /TF: AP1/GCN4