> PLPR0302 ..AC:X58542 ..OS:Cucumis sativus ..GENE:hpr-A ..PROD:NADH-dependent hydroxypyruvate reductase ..[ -200: +51] ..CDS:+62 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.39 G - 0.12 T - 0.23 C - 0.25
1 agcaaagcag agacacaaat ccatccttta atattccgct acaacgcaac
51 tcatcaaatc caatactaaa acaaacaaaa caagtcaaca gtcaaacttt
101 acgaatattc tATTGGacag ctaaaactcc ctccagtact atcacctcac
151 ctgattacaa tcgaaattTT TAAAAAccaa ccgaaatgaa aaatgccttc
201 AGCAATCGCT CACTTCAGTG GTGGAGAAAA GAGCTTCCAA GCTTTCAAGG
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP01678 Mean Expected Number 0.001 -strand -86 : -97 CAATAgAATATT
AC RSP01767 Mean Expected Number 0.004 -strand -29 : -37 TAAAAATTT
Totally 2 motifs of 2 different REs have been found
Description of REs found
1496. Group TF: AT-Hook TFs /AC: RSP01678//OS: Catharanthus roseus /GENE: ORSA3/RE: JRE (Quant. Seq.) /TF: AT-Hook TFs
1570. Group RE: AT-rich element /AC: RSP01767//OS: Zea mays /GENE: Bz1/RE: AT-rich element /TF: unknown
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