> PLPR0318 ..AC:X51474.1 NC_003076 ..OS:Arabidopsis thaliana ..GENE:kin1 ..PROD:cold and ABA-inducible protein ..[ -200:  +51]  ..CDS:  +61 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.40   G -  0.11   T -  0.24   C -  0.25

      1  acagaaagag tcacattatt atatcctcta aaaaaccaaa ctaaaacgac
     51  acgtgaagtc ttgatcagcc gataaatagc taccgacata aggcaaaact
    101  gatcgtacca tcaaatgtaa tccacgtggt tttagattac tcgtggcacc
    151  acactccctt tagccTATAA ATAtaaacca ttaagcccac atctcttctc
    201  ATCATCACTA ACCAAAACAC ACTTCAAAAA CGATTTTACA AGAAATAAAT
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00340   Mean Expected Number 0.002   -strand   -144 : -153   TtCACGTGTC
AC RSP00524   Mean Expected Number 0.007   +strand   -152 : -146   ACACGTG
AC RSP00682   Mean Expected Number 0.001   -strand    -71 :  -80   aCCACGTGGA
AC RSP00718   Mean Expected Number 0.000   +strand    -79 :  -72   CCACGTGG
AC RSP00718   Mean Expected Number 0.000   -strand    -72 :  -79   CCACGTGG
AC RSP00750   Mean Expected Number 0.005   -strand    +44 :  +33   TTcTTGTAAAAT
AC RSP01009   Mean Expected Number 0.002   +strand   -120 : -112   TACCGACAT
AC RSP01010   Mean Expected Number 0.002   +strand   -120 : -112   TACCGACAT
AC RSP01035   Mean Expected Number 0.007   -strand   -147 : -153   ACGTGTC
AC RSP01112   Mean Expected Number 0.000   +strand   -123 : -107   AGCTACCGACATAAGGC
AC RSP01139   Mean Expected Number 0.000   +strand    -77 :  -69   ACGTGGTTT
AC RSP01296   Mean Expected Number 0.009   +strand    -36 :  -28   CTATAAATA
AC RSP01734   Mean Expected Number 0.010   +strand    -80 :  -74   TCCACGT

  Totally      13 motifs of    12 different REs have been found


Description of REs found

  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  651. Group TF: GBF3 /AC: RSP00682//OS: Arabidopsis thaliana /GENE: Adh/RE: -214 G-box (core) /TF: GBF3
  683. Group TF: GBF /AC: RSP00718//OS: Arabidopsis thaliana /GENE: Adh/RE: G-box-1 /TF: GBF ||Identical REs AC:  RSP01254
  712. Group TF: GT-1 /AC: RSP00750//OS: Catharanthus roseus /GENE: STR/RE: BN rev /TF: GT-1
  934. Group TF: DREB1A; DREB2A /AC: RSP01009//OS: Arabidopsis thaliana /GENE: rd29A/RE: DREB1A/DREB2A BS /TF: DREB1A; DREB2A ||Identical REs AC:  RSP01610  RSP01763  RSP01771  RSP01779
  935. Group TF: DREB2A /AC: RSP01010//OS: Arabidopsis thaliana /GENE: rd29A/RE: DREB2A BS /TF: DREB2A
  960. Group TF: ABI3; ABI5; AREB1 /AC: RSP01035//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 3 /TF: ABI3; ABI5; AREB1
 1030. Group RE: DRE /AC: RSP01112//OS: Brassica napus /GENE: LUC/RE: DRE /TF: unknown
 1057. Group RE: Region B1 /AC: RSP01139//OS: Zea mays /GENE: Adh1/RE: Region B1 /TF: unknown
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1542. Group TF: CAMTA3 /AC: RSP01734//OS: Arabidopsis thaliana /GENE: CBF2/RE: CM4 /TF: CAMTA3