> PLPR0319 ..AC:AY382595.1 ..OS:Craterostigma plantagineum ..GENE:CpEdi-9 ..PROD:early dehydration inducible protein ..[ -200:  +51]  ..CDS:  +42 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.37   G -  0.12   T -  0.23   C -  0.29

      1  cataaggacc atttttaaca atttaataac ataaagcatc tccacgttat
     51  ggcagtttct agatagaccc cttacgtgtc ctaagcacaa acctccttca
    101  cctcccaaac caacaagaat ctgccaccaa gtccatcgac tccatattct
    151  ccacgtaact caaaacgtcT ATAAATAgca taaaagaact caacaatgct
    201  CACAGATTGC AGGGAAAAAA CACACAGAGA ACTCGTTTCC TATGCAACAC
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00070   Mean Expected Number 0.001   +strand   -128 : -121   TACGTGTC
AC RSP00189   Mean Expected Number 0.003   +strand    -51 :  -42   TCCACGTAaC
AC RSP00247   Mean Expected Number 0.002   -strand   -121 : -130   GaCACGTAAG
AC RSP01024   Mean Expected Number 0.008   -strand   -141 : -147   AGAAACT
AC RSP01035   Mean Expected Number 0.005   +strand   -127 : -121   ACGTGTC
AC RSP01261   Mean Expected Number 0.001   +strand   -129 : -122   TTACGTGT
AC RSP01274   Mean Expected Number 0.005   +strand    -51 :  -42   TCCACGTAaC
AC RSP01275   Mean Expected Number 0.005   +strand   -160 : -151   TCCACGTtAT
AC RSP01296   Mean Expected Number 0.005   +strand    -32 :  -24   CTATAAATA
AC RSP01708   Mean Expected Number 0.007   +strand    -32 :  -23   CTATAAATAG
AC RSP01708   Mean Expected Number 0.007   -strand    -23 :  -32   CTATTTATAG
AC SP017556   Mean Expected Number 0.006   +strand    -68 :  -61   CCATCGAC

  Totally      12 motifs of    11 different REs have been found


Description of REs found

   69. Group TF: TRAB1 /AC: RSP00070//OS: Oryza sativa /GENE: Osem/RE: ABRE motif A /TF: TRAB1
  183. Group TF: ABI5 /AC: RSP00189//OS: Arabidopsis thaliana /GENE: AtEm1/RE: ABRE/1.3 /TF: ABI5
  240. Group TF: REB /AC: RSP00247//OS: Oryza sativa /GENE: alpha-globulin/RE: REB1 /TF: REB ||Identical REs AC:  RSP00738
  949. Group RE: R1 /AC: RSP01024//OS: Arabidopsis thaliana /GENE: GapB/RE: R1 /TF: unknown
  960. Group TF: ABI3; ABI5; AREB1 /AC: RSP01035//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 3 /TF: ABI3; ABI5; AREB1
 1163. Group TF: GBF1 /AC: RSP01261//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS8 /TF: GBF1
 1173. Group RE: ACE 1 /AC: RSP01274//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 1 /TF: unknown
 1174. Group RE: ACE 2 /AC: RSP01275//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 2 /TF: unknown
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1516. Group TF: RIN /AC: RSP01708//OS: Solanum lycopersicum /GENE: Synthetic OLIGO/RE: RIN BSC [MEF2] /TF: RIN
 1561. Group TF: C1 /AC: SP017556//OS: Glycine max /GENE: a2/RE: C1BS2 /TF: C1

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