> PLPR0320 ..AC:U55051 ..OS:Pseudotsuga menziesii ..GENE:gPmMTa ..PROD:metallothionein-like protein ..[ -200:  +51]  ..CDS:  +91 ..TSS:201 (+1) |Taxon: Conifers |Promoter: TATA
  Nucleotide Frequencies:  A -  0.25   G -  0.21   T -  0.30   C -  0.24

      1  aaagcaaaag caaagcttat tctgtgtatt gcaatttcca acgttgaaag
     51  atccattatt gagatgccct gtcccacttc gatgagattc caccacgtgt
    101  cttgcgcctt tcATTGTtgt ttggattcta atggcgggtc tgtgggccat
    151  accttcagct tcggccactT ATAAATGcca cggaaggctg ctcttcttct
    201  CAACAATCAA AGCAAAATCA GAGAGAATTC TGTGTATTGC GGTTTCCCGA
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00204   Mean Expected Number 0.003   -strand   -100 : -109   GACACGTGGt
AC RSP00247   Mean Expected Number 0.005   +strand    -24 :  -15   GCCACGgAAG
AC RSP00340   Mean Expected Number 0.007   +strand   -109 : -100   aCCACGTGTC
AC RSP00447   Mean Expected Number 0.003   +strand     +6 :  +15   AtCAAAGCAA
AC RSP00574   Mean Expected Number 0.008   -strand   -177 : -184   CAGAATAA
AC RSP00792   Mean Expected Number 0.008   -strand    -77 :  -86   CCAAaCAACA
AC RSP01000   Mean Expected Number 0.005   -strand    -51 :  -60   ATGgCCCACA
AC RSP01255   Mean Expected Number 0.003   -strand   -101 : -108   ACACGTGG

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  197. Group TF: ABI5 /AC: RSP00204//OS: Arabidopsis thaliana /GENE: AtEm6/RE: ABRE/6.2 /TF: ABI5 ||Identical REs AC:  RSP01151
  240. Group TF: REB /AC: RSP00247//OS: Oryza sativa /GENE: alpha-globulin/RE: REB1 /TF: REB ||Identical REs AC:  RSP00738
  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  427. Group TF: Dof1 /AC: RSP00447//OS: Zea mays /GENE: pepcZm2A/RE: box b /TF: Dof1
  550. Group RE: AT-rich K /AC: RSP00574//OS: Lycopersicon esculentum /GENE: rbcS1/RE: AT-rich K /TF: unknown
  745. Group RE: DAE /AC: RSP00792//OS: Hordeum vulgare /GENE: Amy32b/RE: DAE /TF: unknown
  921. Group TF: CBF /AC: RSP01000//OS: Agrobacterium tumefaciens /GENE: T-cyt/RE: 3'-III element /TF: CBF
 1158. Group TF: GBF1 /AC: RSP01255//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS2 /TF: GBF1