> PLPR0329 ..AC:D13718.1 ..OS:Nicotiana sylvestris ..GENE:psaDb ..PROD:PSI-D1 (precursor) ..[ -200: +51] ..CDS: +23 ..TSS:201 (+1) # Alternative TSS(s): +9 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.24 G - 0.11 T - 0.37 C - 0.28
1 tgtggtcaca cctcaaacta aatcaaccag tttgcatttt tttccttctc
51 aatgttaatt tgctgacttg gctagggtgc gaatcaaatc acacgttcta
101 ATTGGgcaaa atccgtatat caccttatcc tatatccttt ttctccacca
151 cccatcatct cttctatgca acaaaaatag cttcttcctt ttcatttttc
201 ACTTCTCTCA ATCCAACTTT TCTATGGCCA TGGCATCCCA AGCTTCCCTT
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00248 Mean Expected Number 0.001 -strand -129 : -138 GCCAaGTCAG
AC RSP01046 Mean Expected Number 0.002 +strand +9 : +17 CAATCCAAC
Totally 2 motifs of 2 different REs have been found
Description of REs found
241. Group TF: REB /AC: RSP00248//OS: Oryza sativa /GENE: alpha-globulin/RE: REB2 /TF: REB
970. Group RE: NON /AC: RSP01046//OS: Nicotiana tabacum /GENE: histone genes (oligo)/RE: NON /TF: unknown
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