> PLPR0330 ..AC:AY267899.1 ..OS:Nicotiana plumbaginifolia ..GENE:ABC1 ..PROD:ABC1 protein ..[ -200: +51] ..CDS: +77 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.36 G - 0.09 T - 0.35 C - 0.20
1 aataattcaa attaaattcg tcaaaatatt aggtcaataa ttccaaagac
51 caaagtacta tgcatgtata cgaccaatta aaaattaaaa caatgctata
101 gccgcccctt cctctttgct gctatataat accttctcct tagacaacta
151 accttaactt ctccttctat tcttttgttc ttgtaataaa gaagattaca
201 CTAATTTCAC ATTTTCAGTT CATTTGATCA AATTATAAAA TATTTTGAAA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00030 Mean Expected Number 0.001 +strand -101 : -95 AGCCGCC
AC RSP00438 Mean Expected Number 0.003 -strand -95 : -100 GGCGGC
AC RSP00807 Mean Expected Number 0.003 +strand -100 : -95 GCCGCC
AC RSP01741 Mean Expected Number 0.000 -strand -161 : -173 TTATTGACCtAAT
Totally 4 motifs of 4 different REs have been found
Description of REs found
29. Group TF: EREBP /AC: RSP00030//OS: Nicotiana sylvestris /GENE: OLP/RE: ERRE /TF: EREBP ||Identical REs AC: RSP00082 RSP01344 RSP01523 RSP01764 RSP01775
418. Group RE: PR-box /AC: RSP00438//OS: Arabidopsis thaliana /GENE: PR-1/RE: PR-box /TF: unknown
760. Group RE: GCC box /Group TF: Pti4 /AC: RSP00807//OS: Arabidopsis thaliana /GENE: PDF1.2/RE: GCC box /TF: Pti4 ||Identical REs AC: RSP00809 RSP00811 RSP00814 RSP00921 RSP01328
1548. Group TF: WRKY11 /AC: RSP01741//OS: Arabidopsis thaliana /GENE: SIRK/FRK1 (At2g19190)/RE: AtSIRKp (WRKY11) BS3 /TF: WRKY11
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