> PLPR0331 ..AC:AF209212.1 M73029.1 ..OS:Zea mays ..GENE:P (P1-rr) ..PROD:myb-like transcription factor (P) protein .. [-35:+50] .. ..CDS: +321 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.25 G - 0.23 T - 0.25 C - 0.27
1 cacgacctcg gcgccatagc ctatggcgcc gagcaaaggg tccaaaactg
51 catttaaaat ttttttaggt ctaaacgtga ttttacttct gtttaagggc
101 taaaatacaa acgtgcactc tgcactctac taagcgctag tgtacgtacg
151 tacgtactcc gtccgctgct atattatggc cggccgtggc gtgccctctc
201 TAGCCAGCAC AGCACACACA CTGGAAAGTG CAAGCTGTAG TGAGACCTGC
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00642 Mean Expected Number 0.004 -strand -145 : -152 TAAATGCA
AC RSP00933 Mean Expected Number 0.000 +strand -148 : -136 TTTAaAATTTTTT
AC RSP01071 Mean Expected Number 0.008 +strand -93 : -84 CAAACGTgCA
Totally 3 motifs of 3 different REs have been found
Description of REs found
617. Group RE: L1-box /AC: RSP00642//OS: Arabidopsis thaliana /GENE: PDF1/RE: L1-box /TF: unknown
862. Group RE: AT-2a /AC: RSP00933//OS: Pinus sylvestris /GENE: GS1a/RE: AT-2a /TF: unknown
989. Group TF: PvAlf /AC: RSP01071//OS: Arachis hypogea; Phaseolus vulgaris /GENE: Em/RE: Em1c /TF: PvAlf ||Identical REs AC: RSP01153
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