> PLPR0334 ..AC:X64352.1 ..OS:Spinacia oleracea ..GENE:psaF ..PROD:photosystem I subunit III ..[ -200: +51] ..CDS: +188 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.39 G - 0.09 T - 0.23 C - 0.29
1 cgacccgctt aaaaattggt acccaatgaa atgagtctaa tcaaaccatg
51 ccaccgtgga actgatctac aaaataagct agtcctcgtc ataagcttgt
101 gttatccaca ttccccaacc caaccctaca ttcaaatcta cccaaatcac
151 acacccaaac attcaagtta agaaatctga aaaacaaaca cccaaaatat
201 GAACAAACCA ATTGAAACCA TACAACTCAA CCTCCTTTAC TAATTTCATC
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00940 Mean Expected Number 0.010 -strand -140 : -149 TTCcACGGTG
AC RSP00979 Mean Expected Number 0.002 +strand +18 : +27 CCATACAACT
AC RSP01088 Mean Expected Number 0.001 -strand -177 : -184 GGGTACCA
Totally 3 motifs of 3 different REs have been found
Description of REs found
869. Group TF: GBF /AC: RSP00940//OS: Lycopersicon esculentum /GENE: RbcS-3.6/RE: box II* /TF: GBF
901. Group RE: Box I /AC: RSP00979//OS: Glycine max /GENE: vspA/RE: Box I /TF: unknown
1006. Group TF: CRR1 /AC: RSP01088//OS: Helianthus annuus /GENE: CYC6; CPX1; CRD1; CTR; CTH1locus;/RE: CuRE 2 /TF: CRR1
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