> PLPR0339 ..AC:X06398 ..OS:Pisum sativum ..GENE:cvcA ..PROD:convicilin polypeptide ..[ -200: +51] ..CDS: +29 |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.32 G - 0.10 T - 0.31 C - 0.27
1 taatcaacaa ctcaacccgc gagctcatcc gcacctttct aacagttaca
51 atacaactca gttgccacct ctattttgtt catttcaaca ctcgtcaagt
101 tacatgacAC AATgtaccca aatgaccatc cacgttattc atctagcttt
151 acgttctatc acTATAAATA tccttcaact taatctttta tttcatcatc
201 TAAAGTTCGA ACTAGTGAAA TACAAATCAT GGCGACCACT GTCAAATCAC
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00132 Mean Expected Number 0.004 +strand -137 : -130 GCCACCTC
AC RSP01275 Mean Expected Number 0.006 +strand -72 : -63 TCCACGTtAT
AC RSP01296 Mean Expected Number 0.006 +strand -39 : -31 CTATAAATA
Totally 3 motifs of 3 different REs have been found
Description of REs found
130. Group TF: ROM1; ROM2 /AC: RSP00132//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: vicilin box /TF: ROM1; ROM2
1174. Group RE: ACE 2 /AC: RSP01275//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 2 /TF: unknown
1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
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