> PLPR0346 ..AC:X60115.1 ..ACOS:Arabidopsis thaliana ..GENE:AHA3 ..PROD:H+-ATPase ..[ -200:  +51]  ..CDS: +198 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.38   G -  0.16   T -  0.27   C -  0.18

      1  caaagtgatg atattaaatc tttcctcctt gacaagacga taatacttca
     51  attaacaaaa aaaaaaaaaa aaagagatga taatttttcc agaataaaat
    101  attttcgact tggactggga ataaaaaaaa tggggtgacc taaaccgacg
    151  tcgcatagtt acgagaggca TATAAATAga gagccaccaa atagcctaac
    201  GTAGTCCACC TTCACTTGCT CTCTTTTTTC CGAAGAATCT GGTTCGTTTC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00354   Mean Expected Number 0.005   +strand     -4 :   +4   TAACGTAG
AC RSP00445   Mean Expected Number 0.003   +strand   -133 : -124   AAAAAAGAGA
AC RSP00445   Mean Expected Number 0.005   -strand    +29 :  +20   AAAAAAGAGA
AC RSP01678   Mean Expected Number 0.008   +strand   -109 :  -98   gAATAAAATATT

  Totally       4 motifs of     3 different REs have been found


Description of REs found

  339. Group RE: GARE1 /AC: RSP00354//OS: Oryza sativa /GENE: Rep-1/RE: GARE1 /TF: unknown
  425. Group TF: Dof1 /AC: RSP00445//OS: Zea mays /GENE: cyPPDK1/RE: box e /TF: Dof1
 1496. Group TF: AT-Hook TFs /AC: RSP01678//OS: Catharanthus roseus /GENE: ORSA3/RE: JRE (Quant. Seq.) /TF: AT-Hook TFs

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