> PLPR0352 ..AC:X07014 ..OS:Pisum sativum ..GENE:legJ ..PROD:legumin ..[ -200:  +51]  ..CDS:  +55 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.27   G -  0.14   T -  0.31   C -  0.27

      1  ttgtggtatt tggatatata ctaattatca atctgtgaag aatgaatgaa
     51  gcggctactt gcgctgcgtc ccacatatga tgtgtatcaa tttaggactc
    101  catagccatg catgctgaAC AATgtcatac acattctgtc acacgtgttc
    151  ctatctcacc cttcccctct tccTATAAAT Caccacaaca cagcttctcc
    201  ACTTCACCAC TTCACTCACC AATCTCTCCT TAGTAGTTTA TGATCAGAGT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00108   Mean Expected Number 0.003   +strand    -94 :  -87   CATGCATG
AC RSP00108   Mean Expected Number 0.003   -strand    -87 :  -94   CATGCATG
AC RSP00524   Mean Expected Number 0.009   +strand    -60 :  -54   ACACGTG
AC RSP01074   Mean Expected Number 0.001   +strand    -95 :  -86   CCATGCATGC
AC RSP01074   Mean Expected Number 0.001   -strand    -86 :  -95   GCATGCATGg
AC RSP01076   Mean Expected Number 0.003   -strand    -87 :  -96   CATGCaTGGC
AC RSP01170   Mean Expected Number 0.000   +strand   -102 :  -77   TCCATAGCCATGCATGCTGAAcAATG
AC RSP01171   Mean Expected Number 0.000   +strand   -102 :  -77   TCCATAGCCATGCATgCTGAAcAATG
AC RSP01173   Mean Expected Number 0.000   +strand   -101 :  -77   cCaTAGCCATGCATGCTGAACAATG
AC RSP01256   Mean Expected Number 0.003   +strand    -60 :  -53   ACACGTGT
AC RSP01256   Mean Expected Number 0.003   -strand    -53 :  -60   ACACGTGT
AC RSP01469   Mean Expected Number 0.009   +strand    -62 :  -53   TCACAcGTGT

  Totally      12 motifs of     9 different REs have been found


Description of REs found

  106. Group RE: RY4 /AC: RSP00108//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY4 /TF: unknown ||Identical REs AC:  RSP01169  RSP01452
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  992. Group TF: PvAlf /AC: RSP01074//OS: Arachis hypogea; Phaseolus vulgaris /GENE: Em/RE: Sph /TF: PvAlf
  994. Group TF: CpbZIP1; CpbZIP2 (short) /AC: RSP01076//OS: Craterostigma plantagineum (Scrophulariaceae) /GENE: CpC2/RE: ABRE III /TF: CpbZIP1; CpbZIP2 (short)
 1081. Group RE: CATGCATG-like motif /AC: RSP01170//OS: Vicia faba /GENE: PsLegB/RE: CATGCATG-like motif /TF: unknown
 1082. Group RE: CATGCATG-like motif /AC: RSP01171//OS: Glycine max /GENE: GmGly/RE: CATGCATG-like motif /TF: unknown
 1084. Group RE: CATGCATG-like motif /AC: RSP01173//OS: Pisum sativum /GENE: PsLegJ/RE: CATGCATG-like motif /TF: unknown
 1159. Group TF: GBF1 /AC: RSP01256//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS3 /TF: GBF1
 1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)