> PLPR0359 ..AC:AB097088.1 ..OS:Glycine max ..GENE:GmPEPC7 ..PROD:phosphoenolpyruvate carboxylase ..[ -200: +51] ..CDS: +441 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.37 G - 0.14 T - 0.31 C - 0.17
1 gttcgcattg aagaacagaa aaatgtatac taactggact gaaggataga
51 atcttggaaa cttaaaagca tattccgtca tcagcagtaa taattaggtt
101 cgacgaaaAC AATaaaaggt aacaaaaaaa aatattttta ggcacgtaaa
151 aatgtctcta cttttcTATA TAAAgacacc cttatgcata ctttaagatc
201 AGAACAACAC TATCTCTCTT TTTGATCCAT TTTTCATTCG TTGTGATCTT
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00985 Mean Expected Number 0.006 +strand -109 : -100 AaTTAGGTTC
AC RSP01031 Mean Expected Number 0.009 +strand -153 : -146 AGAATCTT
AC RSP01632 Mean Expected Number 0.002 +strand -140 : -130 CTTAAAAGCAT
AC RSP01634 Mean Expected Number 0.000 -strand -188 : -198 CTTCAATGCGA
AC RSP01642 Mean Expected Number 0.005 +strand -51 : -42 AAATGTCTCt
AC RSP01725 Mean Expected Number 0.001 +strand -61 : -50 AGgCACGTAAAA
Totally 6 motifs of 6 different REs have been found
Description of REs found
906. Group TF: PBP (Myb305) /AC: RSP00985//OS: Antirrhinum majus /GENE: gPAL2/RE: P-box /TF: PBP (Myb305)
956. Group TF: AEF /AC: RSP01031//OS: Arabidopsis thaliana /GENE: GapB/RE: AE box 2 /TF: AEF
1452. Group RE: TERE /AC: RSP01632//OS: Arabidopsis thaliana /GENE: At5g51890/RE: TERE /TF: unknown
1454. Group RE: TERE /AC: RSP01634//OS: Arabidopsis thaliana /GENE: At3g62160/RE: TERE /TF: unknown
1462. Group RE: ARE /AC: RSP01642//OS: Nicotiana tabacum /GENE: WIPK/RE: ARE /TF: unknown
1533. Group TF: STF1/HY5 /AC: RSP01725//OS: Arabidopsis thaliana /GENE: NAC1 (At1g56010)/RE: G/A-box /TF: STF1/HY5
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