> PLPR0365 ..AC:AF031233.1 ..OS:Malus domestica ..GENE:polygalacturonase (MdPG) ..PROD:polygalacturonase ..[ -200:  +51]  ..CDS: +272 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.34   G -  0.14   T -  0.22   C -  0.30

      1  caacgactta cgttgtaaca taagggatgc aatgcatggc gcagaaagtc
     51  atagagtcgg caaagacatc atttcgtctg aatctctcat gtccgagaac
    101  ccatacctca agagcccaag acgacACAAT acacaacaat caccgtcaat
    151  acccttctct tccgctgccT ATAAATAcca atggaaatcc cacgacattc
    201  TCACCAAATC ATCATCACTT GAACACACCA ATCCTTACAC TTCTAGCTAC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00232   Mean Expected Number 0.009   +strand   -155 : -146   AaGTCATAGA
AC RSP00509   Mean Expected Number 0.002   +strand    -31 :  -20   TATAAATACCAa
AC RSP01296   Mean Expected Number 0.003   +strand    -32 :  -24   CTATAAATA
AC RSP01301   Mean Expected Number 0.001   +strand    -32 :  -23   CTATAAATAC

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  225. Group RE: LS7 /Group TF: TGA2 & NPR1/NIM1 /AC: RSP00232//OS: Arabidopsis thaliana /GENE: PR-1/RE: LS7 /TF: TGA2 & NPR1/NIM1
  485. Group RE: TATA box /AC: RSP00509//OS: Avena fatua /GENE: alpha-Amy2/A/RE: TATA box /TF: unknown
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302