> PLPR0370 ..AC:AF354752.1 AF280748.1 Y15253.2 ..OS:Pisum sativum ..GENE:plc ..PROD:phospholipase C ..[ -200: +51] ..CDS: +102 ..TSS:201 (+1) # Alternative TSS(s): +9 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.34 G - 0.10 T - 0.28 C - 0.28
1 aactcatgtt ttctcaaaaa ataataataa taacaactca tgtgacatct
51 taccacattc attcctatgt tgccgtgtgc cccatccgac attaacttta
101 ttgaatggaa gttacaacgt gggacccaac cgacaacaac ttcttttctc
151 ttctattgcc aaccaaacaa ggaacgtatc ctttcccttt catctcagat
201 CAAAAAACAT TATCCCAATA CACATAACTC ACACGCATTC ACCATACACC
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP01033 Mean Expected Number 0.004 -strand -29 : -38 CCTTGTTTGG
AC RSP01136 Mean Expected Number 0.006 -strand -154 : -160 TGTCACA
AC RSP01469 Mean Expected Number 0.007 -strand -156 : -165 TCACATGaGT
Totally 3 motifs of 3 different REs have been found
Description of REs found
958. Group TF: FLC /AC: RSP01033//OS: Arabidopsis thaliana /GENE: FT/RE: CArG box /TF: FLC ||Identical REs AC: RSP01204
1054. Group RE: TGTCACA motif /AC: RSP01136//OS: Cucumis melo /GENE: Cucumisin/RE: TGTCACA motif /TF: unknown
1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)
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