> PLPR0371 ..AC:AF121139.2 ..OS:Oryza sativa L. subsp. indica ..GENE:RIM2 ..PROD:RIM2 protein ..[ -200:  +51]  ..CDS: +149 ..TSS:201 (+1) # Alternative TSS(s): +2 |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.29   G -  0.27   T -  0.24   C -  0.20

      1  cgagcagggc cacaaaaagt tggataccac tctggagttc ctgcaatgga
     51  aggcaaaaaa tggtgttagt gacaaggcat ttggcgattt attgaaactc
    101  gtcaagaaca ttcttccgga gggaaacaaA TTGCccgtga caacgtacga
    151  ggctaaggag atagtcctgc cctctaggac tgaagttcag agattcacgc
    201  ATGTCCTGTT TGATTGTATC CTATATCGCG GTGAGGGGTA CGAGAACCTA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP01091   Mean Expected Number 0.002   -strand    +19 :   +9   ATAcAATCAAA
AC RSP01209   Mean Expected Number 0.007   -strand   -182 : -191   CTTTTTGTGG
AC RSP01470   Mean Expected Number 0.006   +strand     -6 :   +4   TCAcGCATGT

  Totally       3 motifs of     3 different REs have been found


Description of REs found

 1009. Group RE: box 1 /AC: RSP01091//OS: Pisum sativum /GENE: GS2/RE: box 1 /TF: unknown
 1119. Group RE: EM1 /Group TF: MADS box TFs /AC: RSP01209//OS: Lepidium africanum /GENE: LaCRC/RE: EM1 /TF: MADS box TFs
 1340. Group TF: Opaque-2 (O2) /AC: RSP01470//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z2 /TF: Opaque-2 (O2)

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