> PLPR0384 ..AC:X15711.1 ..OS:Zea mays ..GENE:ANT-G1 ..PROD:adenine nucleotide translocator ..[ -200: +51] ..CDS: +221 ..TSS:201 (+1) # Alternative TSS(s): +2 +24 |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.24 G - 0.18 T - 0.42 C - 0.16
1 tataattgca cttttatctg tcattgactt aatgtttata cacaggctct
51 ctttttcaat taactgtgtt gagctttggc ttttactctg ttgaaacaca
101 gaaaatatgt tgtttctgta gctttgttac tatataatat gcatcttttt
151 tacacacagt tagacgtgga gatctgttat tctttatgca ctatcctaag
201 TTGTGTGTCT TGATATTATG TTGCAGCCAA TAGTTTTCAG GTGGCAATGG
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00057 Mean Expected Number 0.002 -strand -31 : -40 TCCACGTCTa
AC RSP00773 Mean Expected Number 0.003 +strand -176 : -167 TGACTTAATG
AC RSP01734 Mean Expected Number 0.005 -strand -31 : -37 TCCACGT
AC RSP01739 Mean Expected Number 0.001 +strand -180 : -168 TcATTGACTTAAT
Totally 4 motifs of 4 different REs have been found
Description of REs found
56. Group TF: ABF /AC: RSP00057//OS: Zea mays /GENE: rab28/RE: ABRE B /TF: ABF
729. Group RE: Box III /AC: RSP00773//OS: Brassica oleracea /GENE: SLR1/RE: Box III /TF: unknown
1542. Group TF: CAMTA3 /AC: RSP01734//OS: Arabidopsis thaliana /GENE: CBF2/RE: CM4 /TF: CAMTA3
1546. Group TF: WRKY11 /AC: RSP01739//OS: Arabidopsis thaliana /GENE: SIRK/FRK1 (At2g19190)/RE: AtSIRKp (WRKY11) BS1 /TF: WRKY11
Download This Page
Download Promoter Sequence in FASTA Format