> PLPR0385 ..AC:X15712.1 ..OS:Zea mays ..GENE:ANT-G2 ..PROD:adenine nucleotide translocator ..[ -200: +51] ..CDS: +221 ..TSS:201 (+1) # Alternative TSS(s): +2 +19 +24 |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.20 G - 0.22 T - 0.45 C - 0.14
1 gtatgtttgt atagttgcat tcattgttta tttctgtcta atagtttatc
51 tgttagtgtt tgcacggagg ctctctgctt cagttagatg tgtctagctt
101 tgatttgttg ttactctatA TTGAaactgt aaaatatact catccttttt
151 tgcacaggtg cggaggtctt attttgtttc tctttatgta atgtcctaag
201 TTTTGTGTGT TGACATTATG TTGCAGCCAA CAGTTTTGAG GTGGTAATGG
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00255 Mean Expected Number 0.000 +strand -63 : -55 ACTCATCCT
AC RSP00850 Mean Expected Number 0.006 +strand +26 : +31 GCCAAC
AC RSP00918 Mean Expected Number 0.010 +strand +9 : +18 GTTGACATTA
Totally 3 motifs of 3 different REs have been found
Description of REs found
248. Group RE: ACTCAT motif /AC: RSP00255//OS: Arabidopsis thaliana /GENE: ProDH/RE: ACTCAT motif /TF: unknown
790. Group RE: CAT /AC: RSP00850//OS: Zea mays /GENE: H4C7/RE: CAT /TF: unknown
849. Group TF: Opaque-2 /AC: RSP00918//OS: Zea mays /GENE: O2/RE: B5-like motif /TF: Opaque-2
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