> PLPR0389 ..AC:X74217.1 ..OS:Zea mays ..GENE:p60.1 (beta-D-glucosidase; ZmGLU1) ..PROD:beta-glucosidae ..[ -200:  +51]  ..CDS:  +58 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.17   T -  0.29   C -  0.21

      1  tcacatctgt atcttacatt atctttaaaa aaatgattca cacattattt
     51  atatatgaga tataataagt ttccaggaag catctttggc gacttacgta
    101  cgtgtatcag agacatggag tgataaactA TTGGgcaacc atttagcaat
    151  cctagctagc cagctcgtcT ATAAATAgat gcatcagctc cacttggtct
    201  ACACACTTCA CAAGCAGCTC AAAGCTCTAG TTCTAGCTAG CTAAGCAAAG
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00057   Mean Expected Number 0.003   -strand    -82 :  -91   TCCAtGTCTC
AC RSP00072   Mean Expected Number 0.007   +strand   -103 :  -97   GTACGTG
AC RSP00474   Mean Expected Number 0.000   -strand     -5 :  -16   CAAGTGGaGCTG
AC RSP00503   Mean Expected Number 0.003   +strand    -49 :  -42   CTAGCTAG
AC RSP00503   Mean Expected Number 0.003   +strand    +33 :  +40   CTAGCTAG
AC RSP00503   Mean Expected Number 0.003   -strand    +40 :  +33   CTAGCTAG
AC RSP00503   Mean Expected Number 0.003   -strand    -42 :  -49   CTAGCTAG
AC RSP00683   Mean Expected Number 0.004   -strand     -3 :  -12   aCCAAGTGGA
AC RSP01093   Mean Expected Number 0.003   +strand    +40 :  +50   gCTAAGCAAAG
AC RSP01296   Mean Expected Number 0.005   +strand    -32 :  -24   CTATAAATA
AC RSP01469   Mean Expected Number 0.008   +strand   -200 : -191   TCACATcTGT
AC RSP01640   Mean Expected Number 0.005   -strand    -83 :  -92   CcATGTCTCT

  Totally      12 motifs of     9 different REs have been found


Description of REs found

   56. Group TF: ABF /AC: RSP00057//OS: Zea mays /GENE: rab28/RE: ABRE B /TF: ABF
   71. Group RE: ACGT box /AC: RSP00072//OS: Oryza sativa /GENE: GluB-1/RE: ACGT box /TF: unknown
  452. Group TF: Alfin1 /AC: RSP00474//OS: Medicago sativa /GENE: MSPRP2/RE: Alfin1 BS4 /TF: Alfin1
  479. Group TF: RITA-1 /AC: RSP00503//OS: Nicotiana tabacum /GENE: Ntltp1/RE: D1 box /TF: RITA-1
  652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
 1011. Group RE: box 2 /AC: RSP01093//OS: Pisum sativum /GENE: GS2/RE: box 2 /TF: unknown
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)
 1460. Group RE: ARE /AC: RSP01640//OS: Nicotiana tabacum /GENE: Beta-glucanase/RE: ARE /TF: unknown