> PLPR0394 ..AC:AF064563.1 ..OS:Hordeum vulgare ..GENE:sbeIIb ..PROD:starch branching enzyme IIb ..[ -200: +51] ..CDS: +124 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.15 G - 0.21 T - 0.18 C - 0.45
1 gccaccgcaa aaccccaaac ctcttcgccc ccatgctacc atccatgcag
51 ccgtccgccc gcgcgcgcgc gttggccacg ccacccggtg gtggccaggc
101 caccacgccg ccactctcgc gtgaaggctc cgtccgcttc ctcctagtcc
151 cactctctgc ccgtgctata tagcatccgc cctccgcccc ctaccaatct
201 TAGCACACCC CCCTGCGCCT CCTCATTTCG CTCGCGTGGG TTTAAGCAGG
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00089 Mean Expected Number 0.004 -strand -5 : -16 TGGTAGGGgGCG
AC RSP01529 Mean Expected Number 0.005 +strand -166 : -156 GCTACCaTCCA
Totally 2 motifs of 2 different REs have been found
Description of REs found
87. Group RE: ARE 231/219 /AC: RSP00089//OS: Chlamydomonas reinhardtii /GENE: Nia1/RE: ARE 231/219 /TF: unknown
1376. Group RE: Box I /AC: RSP01529//OS: Pisum sativum /GENE: PsCHS3/RE: Box I /TF: unknown ||Identical REs AC: RSP01530 RSP01531
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