> PLPR0399 ..AC:X06928 ..OS:Glycine max ..GENE:lox-3 ..PROD:lipoxygenase-3 ..[ -200: +51] ..CDS: +52 |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.29 G - 0.19 T - 0.34 C - 0.18
1 gtaactacta actagtaaga aggaaatgtt gaatataata attattgatt
51 tttatctggt ttggttcttt gcatgcacgt atatgacagt ttggtttgca
101 cATTGGagtc tgagtccgct acaagacatt tatgtatcat catcttcgtt
151 tcttagtctt cctccttaat TATAAATAcc accaagggct gtgcttggca
201 TCCTCACCCA AAAAAAAAGA CCATACATAG TAGTGTTGGT GGGTTGCAAA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00016 Mean Expected Number 0.007 +strand -129 : -123 CATGCAC
AC RSP00509 Mean Expected Number 0.001 +strand -30 : -19 TATAAATACCAc
Totally 2 motifs of 2 different REs have been found
Description of REs found
15. Group RE: RY /AC: RSP00016//OS: Glycine max /GENE: beta-conglycinin/RE: RY /TF: unknown
485. Group RE: TATA box /AC: RSP00509//OS: Avena fatua /GENE: alpha-Amy2/A/RE: TATA box /TF: unknown
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