> PLPR0400 ..AC:AJ238785.1 ..OS:Zea mays ..GENE:mus1 ..PROD:putative DNA mismatch repair protein ..[ -200:  +51]  ..CDS:  +80 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.27   G -  0.18   T -  0.22   C -  0.33

      1  tgataatatt ttaccaaata tttatataat atcgaaacag gttataagtt
     51  tttcaaagac cactgtattt tggcttctgg gagagagacc cacgacgctc
    101  cattccccca cgaaatgaga ctccgcgcgc aaaagccccg tttctcgccg
    151  cgcgcgagaa aaccctacct tttcccgcca cccgtgcgca tttagtcgag
    201  CACATAGTCC GCACTCCGCA CCCCGCATCA CCACCGCCAC CACCAGAACC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00015   Mean Expected Number 0.006   +strand    -30 :  -23   TTTCCCGC
AC RSP00337   Mean Expected Number 0.003   +strand   -183 : -175   ATATTTATA
AC RSP00565   Mean Expected Number 0.006   +strand   -136 : -130   GTATTTT
AC RSP00865   Mean Expected Number 0.000   +strand   -121 : -113   GGAGAGAGA
AC RSP01114   Mean Expected Number 0.005   -strand   -128 : -134   CCAAAAT
AC RSP01600   Mean Expected Number 0.003   +strand   -150 : -143   TTTCAAAG

  Totally       6 motifs of     6 different REs have been found


Description of REs found

   14. Group TF: E2F1 /AC: RSP00015//OS: Arabidopsis thaliana /GENE: AtCDC6/RE: E2F1-BE /TF: E2F1 ||Identical REs AC:  RSP00165  RSP00298
  323. Group TF: SEF1 /AC: RSP00337//OS: Glycine max /GENE: beta-conglicinin (7S globulin) alpha' and beta subunits genes/RE: SEF1 BS /TF: SEF1
  541. Group RE: AT-rich G /AC: RSP00565//OS: Lycopersicon esculentum /GENE: rbcS3B/RE: AT-rich G /TF: unknown
  801. Group TF: BPC1 /AC: RSP00865//OS: Arabidopsis thaliana /GENE: STK/RE: GA-6 /TF: BPC1
 1033. Group RE: CCAAT box-like motif 1 /AC: RSP01114//OS: Agrobacterium tumefaciens /GENE: ags/RE: CCAAT box-like motif 1 /TF: unknown
 1421. Group RE: Inr /AC: RSP01600//OS: Spinacia oleracea /GENE: RPS22/RE: Inr /TF: unknown