> PLPR0407 ..AC:AB026837.1 ..OS:Oryza sativa ..GENE:OsPSK ..PROD:preprophytosulfokine ..[ -200:  +51]  ..CDS: +102 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.31   G -  0.18   T -  0.27   C -  0.24

      1  tactctacca caaaactttg gttgtttttg ctatcatctc aaggccactg
     51  cagcatgcgc attgcgcacg tacgagatgc tactctttcc aaggaaccga
    101  tgtctctctc tctctctcca gcctccATTG Cttataaata tgttcctcct
    151  tcctatactg gtaatggcag caaagcaaag aaacaaagaa gaagaagaaa
    201  GAAGAAGCAG CAGCAAAAAA GTTGATCAGT TAATTAGCAA GTGTGTTCTT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00447   Mean Expected Number 0.007   +strand    -32 :  -23   AGCAAAGCAA
AC RSP00447   Mean Expected Number 0.007   +strand    -27 :  -18   AGCAAAGaAA
AC RSP00864   Mean Expected Number 0.001   -strand    -84 :  -92   AGAGAGAGA
AC RSP00864   Mean Expected Number 0.001   -strand    -86 :  -94   AGAGAGAGA
AC RSP00864   Mean Expected Number 0.001   -strand    -88 :  -96   AGAGAGAGA
AC RSP00864   Mean Expected Number 0.001   -strand    -90 :  -98   AGAGAGAGA
AC RSP00865   Mean Expected Number 0.001   -strand    -82 :  -90   GGAGAGAGA
AC RSP01017   Mean Expected Number 0.009   +strand    -22 :  -15   AGAAACAA
AC RSP01283   Mean Expected Number 0.000   -strand    -83 :  -99   GAGAGAGAGAGAGAGAc
AC RSP01640   Mean Expected Number 0.005   +strand   -103 :  -94   CgATGTCTCT

  Totally      10 motifs of     6 different REs have been found


Description of REs found

  427. Group TF: Dof1 /AC: RSP00447//OS: Zea mays /GENE: pepcZm2A/RE: box b /TF: Dof1
  800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
  801. Group TF: BPC1 /AC: RSP00865//OS: Arabidopsis thaliana /GENE: STK/RE: GA-6 /TF: BPC1
  942. Group TF: AEF /AC: RSP01017//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 2 /TF: AEF
 1180. Group RE: GAGA element /AC: RSP01283//OS: OS: Glycine max /GENE: gsa1/RE: GAGA element /TF: unknown
 1460. Group RE: ARE /AC: RSP01640//OS: Nicotiana tabacum /GENE: Beta-glucanase/RE: ARE /TF: unknown